| Jornada 1 | 30/08/2009 | RAYO VALLEC. | 3 | ALBACETE | 0 |
| Jornada 2 | 06/09/2009 | CARTAGENA | 2 | RAYO VALLEC. | 0 |
| Jornada 3 | 13/09/2009 | GIRONA | 1 | RAYO VALLEC. | 1 |
| Jornada 4 | 20/09/2009 | RAYO VALLEC. | 2 | REAL UNION | 0 |
| Jornada 5 | 27/09/2009 | CASTELLON | 1 | RAYO VALLEC. | 3 |
| Jornada 6 | 04/10/2009 | RAYO VALLEC. | 2 | BETIS | 2 |
| Jornada 7 | 11/10/2009 | VILLARREAL B | 0 | RAYO VALLEC. | 2 |
| Jornada 8 | 18/10/2009 | RAYO VALLEC. | 2 | CADIZ | 2 |
| Jornada 9 | 25/10/2009 | CELTA | 0 | RAYO VALLEC. | 0 |
| Jornada 10 | 01/11/2009 | RAYO VALLEC. | 0 | ELCHE | 1 |
| Jornada 11 | 08/11/2009 | LAS PALMAS | 2 | RAYO VALLEC. | 1 |
| Jornada 12 | 15/11/2009 | RAYO VALLEC. | 2 | MURCIA | 0 |
| Jornada 13 | 22/11/2009 | GIMNASTIC | 1 | RAYO VALLEC. | 1 |
| Jornada 14 | 29/11/2009 | RAYO VALLEC. | 3 | REAL SOCIEDAD | 3 |
| Jornada 15 | 06/12/2009 | HUESCA | 2 | RAYO VALLEC. | 1 |
| Jornada 16 | 13/12/2009 | RAYO VALLEC. | 4 | NUMANCIA | 1 |
| Jornada 17 | 20/12/2009 | SALAMANCA | 0 | RAYO VALLEC. | 1 |
| Jornada 18 | 03/01/2010 | RAYO VALLEC. | 0 | LEVANTE | 0 |
| Jornada 19 | 10/01/2010 | CORDOBA | 0 | RAYO VALLEC. | 0 |
| Jornada 20 | 17/01/2010 | RAYO VALLEC. | 4 | HERCULES | 4 |
| Jornada 21 | 24/01/2010 | RECREATIVO | 2 | RAYO VALLEC. | 0 |
| Jornada 22 | 31/01/2010 | ALBACETE | 2 | RAYO VALLEC. | 2 |
| Jornada 23 | 07/02/2010 | RAYO VALLEC. | 2 | CARTAGENA | 3 |
| Jornada 24 | 14/02/2010 | RAYO VALLEC. | 0 | GIRONA | 3 |
| Jornada 25 | 21/02/2010 | REAL UNION | 2 | RAYO VALLEC. | 1 |
| Jornada 26 | 28/02/2010 | RAYO VALLEC. | 3 | CASTELLON | 0 |
| Jornada 27 | 07/03/2010 | BETIS | 3 | RAYO VALLEC. | 1 |
| Jornada 28 | 14/03/2010 | RAYO VALLEC. | 0 | VILLARREAL B | 2 |
| Jornada 29 | 21/03/2010 | CADIZ | 1 | RAYO VALLEC. | 1 |
| Jornada 30 | 28/03/2010 | RAYO VALLEC. | 1 | CELTA | 2 |
| Jornada 31 | 04/04/2010 | ELCHE | 2 | RAYO VALLEC. | 2 |
| Jornada 32 | 11/04/2010 | RAYO VALLEC. | 3 | LAS PALMAS | 2 |
| Jornada 33 | 18/04/2010 | MURCIA | 0 | RAYO VALLEC. | 3 |
| Jornada 34 | 25/04/2010 | RAYO VALLEC. | 2 | GIMNASTIC | 3 |
| Jornada 35 | 02/05/2010 | REAL SOCIEDAD | 1 | RAYO VALLEC. | 0 |
| Jornada 36 | 09/05/2010 | RAYO VALLEC. | 4 | HUESCA | 1 |
| Jornada 37 | 16/05/2010 | NUMANCIA | 1 | RAYO VALLEC. | 1 |
| Jornada 38 | 23/05/2010 | RAYO VALLEC. | 0 | SALAMANCA | 0 |
| Jornada 39 | 30/05/2010 | LEVANTE | 2 | RAYO VALLEC. | 1 |
| Jornada 40 | 06/06/2010 | RAYO VALLEC. | 3 | CORDOBA | 2 |
| Jornada 41 | 13/06/2010 | HERCULES | 2 | RAYO VALLEC. | 1 |
| Jornada 42 | 20/06/2010 | RAYO VALLEC. | 4 | RECREATIVO | 0 |